Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890400.1_cds_XP_016445084.1_40073
CDS Infomation

[gene=LOC107770307] [db_xref=GeneID:107770307] [protein=putative box C/D snoRNA protein SPCC613.07] [protein_id=XP_016445084.1] [location=join(126370..126613,128240..128441,129343..129411,129603..129735,130035..130805)] [gbkey=CDS]
Sequence

ATGGATGAGAAAGAAGCATCGGCATCAGCTTCAGCTTCAGCGCCATACCCTAACCCCGTA
CAATCAAGTGAATGCGAAGAGTGCAAGTCAAATTCATGGAAATACAAATGCCCTGCTTGC
TCTATACGCACGTGTAGCCTTCCTTGTGTCAAATCCCACAAGGAAAGAACTGGCTGTACT
GGAAAAAGATCGCTCACTGATGTCGTCCCTTTATCCCAATTCAACGATAACATTCTTTTA
TCAGATTATAACATGCTTGAGGATGTTAAGAGAGTTGCTGAATCAGCTAAAAGAATGAGA
CAGAAGCTATGTGGCTACTCTCATTTTAGGCTTCCTTTACATCTGAAGAATCTTCTGCGA
GCTGCTTCTGATCGTAGGACCAAAATACTCTTCCTATCAAGCGGAATGTCGAGAAGATTG
AAAAATCAAACTTATTACAATGAAAGGAAAAAGTTCATATCTTGGACAATTGAATGGCGT
TTTCACTCGACAGATATTGTGTTGATTGATCATGGAGTACATGAAGACACAAGCCTCTGC
TCTGTGATTGAGAATCATTTGAAACCAGGCCCTTGGAATCATCCATTGAGGCAATTCTTT
GAAGAGCCACTGGATTCTCTTAAACTTTTCATCCGCAAAAATCCAAAGGGCACACAATCA
CCTTTTTATCAGTTGGATATAAAGGCTTCGCTGCGTGAACAACTAGCCACTAAGGTTGTC
CTAGAGTACCCTGTCATTTATGTTTTCCTGCCATCGCACAGCTGTGATTTTGAAGTAATC
AAATATTCTGTCCCTCTAAGAGTGGAGCAAAATGAGCTCGATTGTGATAGCCGAAGTCCC
AAGGGAGTAATGTTCAGGGAGGAGGATATAGAAGATGGTGGATCTTTAAACCCACACGTT
TCAGATCTCTTCACTTATACCAACTTAAATGTGGCATCCAAGTCATCTGCCAATAAAAAG
GAGACCAACAAATTGGAAGCGAGCAGAGGTGCCAGATCATTTGTAAATGAACATTTTAAT
GAAGATGACCAACATATATGTGATGACACATACTCAGATCTTGATCTGGTTCATTCATTT
ATGAAAGAAAAGGATCTGGGGGTAAAAGAGGACTGTTCATACTTGTGTGATGTTTTACCT
GTGGAAGGAGAATTTGAGGAAGGAGAGATAGCATTCAAGTCATCTACGGAAAAAAGGGAG
ACTAACAAATCTGTATTATCAGAAGGCCAAAGTTCCAAATCATTTGTAAGTGGACTTCTT
AATGAAAATGACAAAGATATATGTGATGATACATACTCAGATCTTGATTTGTTTCTTTCA
TCTATGAACGAGAAGGATCTGGGGGAAAAACAGGACTATACATATTTGAGTAATGTTCTA
CTCGTGGATGAAGAATTGGAGGAAGGAGAGATAGCTTGA

Peptide Sequence

PEP ID

XP_016445084.1
PEP Infomation

PREDICTED: putative box C/D snoRNA protein SPCC613.07 [Nicotiana tabacum]
Sequence

MDEKEASASASASAPYPNPVQSSECEECKSNSWKYKCPACSIRTCSLPCVKSHKERTGCT
GKRSLTDVVPLSQFNDNILLSDYNMLEDVKRVAESAKRMRQKLCGYSHFRLPLHLKNLLR
AASDRRTKILFLSSGMSRRLKNQTYYNERKKFISWTIEWRFHSTDIVLIDHGVHEDTSLC
SVIENHLKPGPWNHPLRQFFEEPLDSLKLFIRKNPKGTQSPFYQLDIKASLREQLATKVV
LEYPVIYVFLPSHSCDFEVIKYSVPLRVEQNELDCDSRSPKGVMFREEDIEDGGSLNPHV
SDLFTYTNLNVASKSSANKKETNKLEASRGARSFVNEHFNEDDQHICDDTYSDLDLVHSF
MKEKDLGVKEDCSYLCDVLPVEGEFEEGEIAFKSSTEKRETNKSVLSEGQSSKSFVSGLL
NENDKDICDDTYSDLDLFLSSMNEKDLGEKQDYTYLSNVLLVDEELEEGEIA

Transcript Sequence

Gene sequence data has not been registered.